Authors
Brandon Ginley, Kuang-Yu Jen, Seung Seok Han, Luís Rodrigues, Sanjay Jain, Agnes B Fogo, Jonathan Zuckerman, Vighnesh Walavalkar, Jeffrey C Miecznikowski, Yumeng Wen, Felicia Yen, Donghwan Yun, Kyung Chul Moon, Avi Rosenberg, Chirag Parikh, Pinaki Sarder
Publication date
2021/4/1
Journal
Journal of the American Society of Nephrology
Volume
32
Issue
4
Pages
837-850
Publisher
LWW
Description
Background
Interstitial fibrosis, tubular atrophy (IFTA), and glomerulosclerosis are indicators of irrecoverable kidney injury. Modern machine learning (ML) tools have enabled robust, automated identification of image structures that can be comparable with analysis by human experts. ML algorithms were developed and tested for the ability to replicate the detection and quantification of IFTA and glomerulosclerosis that renal pathologists perform.
Methods
A renal pathologist annotated renal biopsy specimens from 116 whole-slide images (WSIs) for IFTA and glomerulosclerosis. A total of 79 WSIs were used for training different configurations of a convolutional neural network (CNN), and 17 and 20 WSIs were used as internal and external testing cases, respectively. The best model was compared against the input of four renal pathologists on 20 new testing slides. Further, for 87 testing biopsy specimens, IFTA and …
Total citations
2021202220232024202592417224
Scholar articles
B Ginley, KY Jen, SS Han, L Rodrigues, S Jain… - Journal of the American Society of Nephrology, 2021